• Le, T., et al. Interactive biomedical segmentation tool powered by deep learning and ImJoy. Nature Methods (2022). https://doi.org/10.1038/s41592-022-01606-z

  • Ouyang, W., Le, T., Xu, H., and Lundberg, E. Interactive biomedical segmentation tool powered by deep learning and ImJoy. F1000Research (2021). https://doi.org/10.12688/f1000research.50798.1

  • Mahdessian, D., Cesnik, A.J., Gnann, C. et al. Spatiotemporal dissection of the cell cycle with single-cell proteogenomics. Nature 590, 649–654 (2021). https://doi.org/10.1038/s41586-021-03232-9

  • Zhernakova, D. V., Le, T. H., Kurilshikov, A., Atanasovska, B., Bonder, M. J., Sanna, S., Claringbould, A., Võsa, U., Deelen, P., Franke, L., de Boer, R. A., Kuipers, F., Netea, M. G., Hofker, M. H., Wijmenga, C., Zhernakova, A., Fu, J., LifeLines cohort study, & BIOS consortium (2018). Individual variations in cardiovascular-disease-related protein levels are driven by genetics and gut microbiome. Nature genetics, 50(11), 1524–1532. https://doi.org/10.1038/s41588-018-0224-7

  • Kolesnikova, T. A, Kiragosyan, G., Le, T. H. N, Springer, S., & Winterhalter, M. (2017). Protein A Functionalized Polyelectrolyte Microcapsules as a Universal Platform for Enhanced Targeting of Cell Surface Receptors. ACS Applied Materials & Interfaces, 9, 11506-11517. doi: 10.1021/acsami.7b01313

Posters/Talks/Hacks

  • Cytodata, Seattle, Oct 2022. Our team won the hackathon!
  • Single cell proteomics, Boston, June 2022. Talk: “Analysis of HPA - Single Cell Classification Challenge”. My first conference talk in the US!
  • Copenhagen Bioscience Conference – Protein Signaling, Copenhagen, Nov 2021. Poster: “Analysis of HPA - Single Cell Classification Challenge”. This was the first in-person conference after the long pandemics, really exciting!
  • Science for Life Laboratory seminar, online, June 2021. Short talk: “Modelling the spatial cell cycle with deep learning”
  • AICS/HPA/CZI/CZB symposium, online, February 2021. Short talk: “Kaggle challenge: HPA - Single Cell Classification”
  • NEUBIAS, Bordeaux, March 2020. Poster presentation: “Deep learning model for the cell cycle”